patch_kernel.hpp

/*---------------------------------------------------------------------------*\
 *
 *  bitpit
 *
 *  Copyright (C) 2015-2021 OPTIMAD engineering Srl
 *
 *  -------------------------------------------------------------------------
 *  License
 *  This file is part of bitpit.
 *
 *  bitpit is free software: you can redistribute it and/or modify it
 *  under the terms of the GNU Lesser General Public License v3 (LGPL)
 *  as published by the Free Software Foundation.
 *
 *  bitpit is distributed in the hope that it will be useful, but WITHOUT
 *  ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
 *  FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
 *  License for more details.
 *
 *  You should have received a copy of the GNU Lesser General Public License
 *  along with bitpit. If not, see <http://www.gnu.org/licenses/>.
 *
\*---------------------------------------------------------------------------*/
 
#ifndef __BITPIT_PATCH_KERNEL_HPP__
#define __BITPIT_PATCH_KERNEL_HPP__
 
#include <cstddef>
#include <deque>
#include <iostream>
#include <memory>
#if BITPIT_ENABLE_MPI==1
#   include <mpi.h>
#endif
#include <set>
#include <string>
#include <vector>
#include <unordered_map>
 
#include "bitpit_IO.hpp"
#if BITPIT_ENABLE_MPI==1
#   include "bitpit_communications.hpp"
#endif
#include "bitpit_containers.hpp"
 
#include "adaption.hpp"
#include "cell.hpp"
#include "compiler.hpp"
#include "interface.hpp"
#include "vertex.hpp"
 
namespace bitpit {
 
class PatchKernel : public VTKBaseStreamer {
 
friend class PatchInfo;
friend class PatchNumberingInfo;
#if BITPIT_ENABLE_MPI==1
friend class PatchGlobalInfo;
#endif
friend class PatchManager;
 
public:
    typedef PiercedVector<Vertex>::iterator VertexIterator;
    typedef PiercedVector<Cell>::iterator CellIterator;
    typedef PiercedVector<Interface>::iterator InterfaceIterator;
 
    typedef PiercedVector<Vertex>::const_iterator VertexConstIterator;
    typedef PiercedVector<Cell>::const_iterator CellConstIterator;
    typedef PiercedVector<Interface>::const_iterator InterfaceConstIterator;
 
    typedef PiercedVector<Vertex>::range VertexRange;
    typedef PiercedVector<Cell>::range CellRange;
    typedef PiercedVector<Interface>::range InterfaceRange;
 
    typedef PiercedVector<Vertex>::const_range VertexConstRange;
    typedef PiercedVector<Cell>::const_range CellConstRange;
    typedef PiercedVector<Interface>::const_range InterfaceConstRange;
 
    enum WriteTarget {
        WRITE_TARGET_CELLS_ALL
#if BITPIT_ENABLE_MPI
        , WRITE_TARGET_CELLS_INTERNAL
#endif
    };

    struct PointPositionLess
    {
        PointPositionLess(double tolerance)
            : m_tolerance(tolerance)
        {
        }
 
        virtual ~PointPositionLess() = default;
 
        bool operator()(std::array<double, 3> point_1, std::array<double, 3> point_2) const
        {
            // Check if the points are coincident
            //
            // To check if two points are coincident, the specified tolerance
            // will be used.
            bool coincident = true;
            for (int k = 0; k < 3; ++k) {
                if (!utils::DoubleFloatingEqual()(point_1[k], point_2[k], m_tolerance)) {
                    coincident = false;
                    break;
                }
            }
 
            if (coincident) {
                return false;
            }
 
            // Compare the position of the points
            //
            // If the points are not coincident, we loop over the coordinates
            // and we compare the first non-coincident coordinate.
            //
            // In order to guarantee a consistent ordering, the test to check
            // if two coordinates are coincident should be performed with no
            // tolerance.
            for (int k = 0; k < 3; ++k) {
                if (point_1[k] == point_2[k]) {
                    continue;
                }
 
                return (point_1[k] < point_2[k]);
            }
 
            return false;
        }
 
        const double m_tolerance;
    };

    struct VertexPositionLess : private PointPositionLess
    {
        VertexPositionLess(const PatchKernel &patch)
            : PointPositionLess(patch.getTol()), m_patch(patch)
        {
        }
 
        virtual ~VertexPositionLess() = default;
 
        bool operator()(long id_1, long id_2) const
        {
            if (id_1 == id_2) {
                return false;
            }
 
            const std::array<double, 3> &coords_1 = m_patch.getVertexCoords(id_1);
            const std::array<double, 3> &coords_2 = m_patch.getVertexCoords(id_2);
 
            return PointPositionLess::operator()(coords_1, coords_2);
        }
 
        const PatchKernel &m_patch;
    };

    struct VertexPositionGreater : private VertexPositionLess
    {
        VertexPositionGreater(const PatchKernel &patch)
            : VertexPositionLess(patch)
        {
        }
 
        bool operator()(long id_1, long id_2) const
        {
            return !VertexPositionLess::operator()(id_1, id_2);
        }
    };

    struct CellPositionLess : private PointPositionLess
    {
        CellPositionLess(const PatchKernel &patch, bool native = true)
            : PointPositionLess(patch.getTol()), m_patch(patch), m_native(native)
        {
        }
 
        virtual ~CellPositionLess() = default;
 
        bool operator()(long id_1, long id_2) const
        {
            if (id_1 == id_2) {
                return false;
            }
 
            std::array<double, 3> centroid_1;
            std::array<double, 3> centroid_2;
            if (m_native) {
                centroid_1 = m_patch.evalCellCentroid(id_1);
                centroid_2 = m_patch.evalCellCentroid(id_2);
            } else {
                centroid_1 = m_patch.PatchKernel::evalCellCentroid(id_1);
                centroid_2 = m_patch.PatchKernel::evalCellCentroid(id_2);
            }
 
            return PointPositionLess::operator()(centroid_1, centroid_2);
        }
 
        const PatchKernel &m_patch;
        bool m_native;
    };

    struct CellPositionGreater : private CellPositionLess
    {
        CellPositionGreater(const PatchKernel &patch, bool native = true)
            : CellPositionLess(patch, native)
        {
        }
 
        bool operator()(long id_1, long id_2) const
        {
            return !CellPositionLess::operator()(id_1, id_2);
        }
    };

    struct CellFuzzyPositionLess : private PointPositionLess
    {
        CellFuzzyPositionLess(PatchKernel &patch)
            : PointPositionLess(patch.getTol()), m_patch(patch)
        {
        }
 
        virtual ~CellFuzzyPositionLess() = default;
 
        bool operator()(long id_1, long id_2) const
        {
            if (id_1 == id_2) {
                return false;
            }
 
            // Select the first vertex of the first cell
            long vertexId_1 = m_patch.getCell(id_1).getVertexId(0);
 
            // The vertex of the second cell is choosen as the first vertex on
            // that cell not equal to the selected vertex of the first cell.
            long vertexId_2 = Vertex::NULL_ID;
            for (long candidateVertexId_2 : m_patch.getCell(id_2).getVertexIds()) {
                if (vertexId_1 != candidateVertexId_2) {
                    vertexId_2 = candidateVertexId_2;
                    break;
                }
            }
 
            if (vertexId_2 == Vertex::NULL_ID) {
                return false;
            }
 
            // Compare the two vertices
            const std::array<double, 3> &vertexCoords_1 = m_patch.getVertex(vertexId_1).getCoords();
            const std::array<double, 3> &vertexCoords_2 = m_patch.getVertex(vertexId_2).getCoords();
 
            return PointPositionLess::operator()(vertexCoords_1, vertexCoords_2);
        }
 
        PatchKernel &m_patch;
    };

    struct CellFuzzyPositionGreater : private CellFuzzyPositionLess
    {
        CellFuzzyPositionGreater(PatchKernel &patch)
            : CellFuzzyPositionLess(patch)
        {
        }
 
        bool operator()(long id_1, long id_2) const
        {
            return !CellFuzzyPositionLess::operator()(id_1, id_2);
        }
    };

    enum AdjacenciesBuildStrategy {
        ADJACENCIES_NONE = -1,
        ADJACENCIES_AUTOMATIC
    };

    enum InterfacesBuildStrategy {
        INTERFACES_NONE = -1,
        INTERFACES_AUTOMATIC
    };

    enum AdaptionMode {
        ADAPTION_DISABLED  = -1, 
        ADAPTION_AUTOMATIC, 
        ADAPTION_MANUAL, 
    };

    enum AdaptionStatus {
        ADAPTION_CLEAN,
        ADAPTION_DIRTY,
        ADAPTION_PREPARED,
        ADAPTION_ALTERED
    };

    enum PartitioningMode {
        PARTITIONING_DISABLED = -1, 
        PARTITIONING_ENABLED 
    };

    enum PartitioningStatus {
        PARTITIONING_CLEAN,
        PARTITIONING_PREPARED,
        PARTITIONING_ALTERED
    };
 
    PatchKernel(PatchKernel &&other);
    PatchKernel & operator=(PatchKernel &&other);
 
    virtual ~PatchKernel();
 
    template<typename patch_t>
    static std::unique_ptr<patch_t> clone(const patch_t *original);
 
    virtual std::unique_ptr<PatchKernel> clone() const = 0;
 
    void setId(int id);
 
    virtual void reset();
    virtual void resetVertices();
    virtual void resetCells();
    virtual void resetInterfaces();
 
    bool reserveVertices(size_t nVertices);
    bool reserveCells(size_t nCells);
    bool reserveInterfaces(size_t nInterfaces);
 
    std::vector<adaption::Info> update(bool trackAdaption = true, bool squeezeStorage = false);
 
    virtual void simulateCellUpdate(const long id, adaption::Marker marker, std::vector<Cell> *virtualCells, PiercedVector<Vertex, long> *virtualVertices) const;
 
    bool isAdaptionSupported() const;
    AdaptionMode getAdaptionMode() const;
    AdaptionStatus getAdaptionStatus(bool global = false) const;
    std::vector<adaption::Info> adaption(bool trackAdaption = true, bool squeezeStorage = false);
    std::vector<adaption::Info> adaptionPrepare(bool trackAdaption = true);
    std::vector<adaption::Info> adaptionAlter(bool trackAdaption = true, bool squeezeStorage = false);
    void adaptionCleanup();
 
    virtual void settleAdaptionMarkers();
 
    void markCellForRefinement(long id);
    void markCellForCoarsening(long id);
    void resetCellAdaptionMarker(long id);
    adaption::Marker getCellAdaptionMarker(long id);
    void enableCellBalancing(long id, bool enabled);
 
    bool isDirty(bool global = false) const;
    BITPIT_DEPRECATED(bool isExpert() const);
 
    int getId() const;
    int getDimension() const;
    virtual void setDimension(int dimension);
    bool isThreeDimensional() const;
 
    virtual int getVolumeCodimension() const = 0;
    virtual int getSurfaceCodimension() const = 0;
    virtual int getLineCodimension() const = 0;
    virtual int getPointCodimension() const = 0;
 
    bool empty(bool global = true) const;
 
    bool isVertexAutoIndexingEnabled() const;
    void setVertexAutoIndexing(bool enabled);
 
    virtual long getVertexCount() const;
    long getInternalVertexCount() const;
#if BITPIT_ENABLE_MPI==1
    long getGhostVertexCount() const;
#endif
    PiercedVector<Vertex> &getVertices();
    const PiercedVector<Vertex> &getVertices() const;
    Vertex &getVertex(long id);
    const Vertex & getVertex(long id) const;
    Vertex &getLastInternalVertex();
    const Vertex &getLastInternalVertex() const;
#if BITPIT_ENABLE_MPI==1
    Vertex &getFirstGhostVertex();
    const Vertex &getFirstGhostVertex() const;
#endif
    const std::array<double, 3> & getVertexCoords(long id) const;
    void getVertexCoords(std::size_t nVertices, const long *ids, std::unique_ptr<std::array<double, 3>[]> *coordinates) const;
    void getVertexCoords(std::size_t nVertices, const long *ids, std::array<double, 3> *coordinates) const;
    VertexIterator addVertex(const Vertex &source, long id = Vertex::NULL_ID);
    VertexIterator addVertex(Vertex &&source, long id = Vertex::NULL_ID);
    VertexIterator addVertex(const std::array<double, 3> &coords, long id = Vertex::NULL_ID);
    BITPIT_DEPRECATED(long countFreeVertices() const);
    long countBorderVertices() const;
    long countOrphanVertices() const;
    std::vector<long> findOrphanVertices();
    bool deleteOrphanVertices();
    std::vector<long> collapseCoincidentVertices();
    bool deleteCoincidentVertices();
 
    VertexIterator getVertexIterator(long id);
    VertexIterator vertexBegin();
    VertexIterator vertexEnd();
    VertexIterator internalVertexBegin();
    VertexIterator internalVertexEnd();
#if BITPIT_ENABLE_MPI==1
    VertexIterator ghostVertexBegin();
    VertexIterator ghostVertexEnd();
#endif
 
    VertexConstIterator getVertexConstIterator(long id) const;
    VertexConstIterator vertexConstBegin() const;
    VertexConstIterator vertexConstEnd() const;
    VertexConstIterator internalVertexConstBegin() const;
    VertexConstIterator internalVertexConstEnd() const;
#if BITPIT_ENABLE_MPI==1
    VertexConstIterator ghostVertexConstBegin() const;
    VertexConstIterator ghostVertexConstEnd() const;
#endif
 
    bool isCellAutoIndexingEnabled() const;
    void setCellAutoIndexing(bool enabled);
 
    virtual long getCellCount() const;
    long getInternalCellCount() const;
    BITPIT_DEPRECATED(long getInternalCount() const);
#if BITPIT_ENABLE_MPI==1
    long getGhostCellCount() const;
    BITPIT_DEPRECATED(long getGhostCount() const);
#endif
    PiercedVector<Cell> &getCells();
    const PiercedVector<Cell> &getCells() const;
    Cell &getCell(long id);
    const Cell &getCell(long id) const;
    virtual ElementType getCellType(long id) const;
    Cell &getLastInternalCell();
    const Cell &getLastInternalCell() const;
#if BITPIT_ENABLE_MPI==1
    Cell & getFirstGhostCell();
    BITPIT_DEPRECATED(Cell & getFirstGhost());
    const Cell & getFirstGhostCell() const;
    BITPIT_DEPRECATED(const Cell & getFirstGhost() const);
#endif
    CellIterator addCell(const Cell &source, long id = Element::NULL_ID);
    CellIterator addCell(Cell &&source, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, const std::vector<long> &connectivity, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, std::unique_ptr<long[]> &&connectStorage, long id = Element::NULL_ID);
#if BITPIT_ENABLE_MPI==1
    CellIterator addCell(const Cell &source, int owner, long id = Element::NULL_ID);
    CellIterator addCell(const Cell &source, int owner, int haloLayer, long id = Element::NULL_ID);
    CellIterator addCell(Cell &&source, int owner, long id = Element::NULL_ID);
    CellIterator addCell(Cell &&source, int owner, int haloLayer, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, int owner, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, int owner, int haloLayer, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, const std::vector<long> &connectivity, int owner, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, const std::vector<long> &connectivity, int owner, int haloLayer, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, std::unique_ptr<long[]> &&connectStorage, int owner, long id = Element::NULL_ID);
    CellIterator addCell(ElementType type, std::unique_ptr<long[]> &&connectStorage, int owner, int haloLayer, long id = Element::NULL_ID);
#endif
    bool deleteCell(long id);
    template<typename IdStorage>
    bool deleteCells(const IdStorage &ids);
#if BITPIT_ENABLE_MPI==1
    CellIterator ghostCell2InternalCell(long id);
    CellIterator internalCell2GhostCell(long id, int owner, int haloLayer);
#endif
    virtual double evalCellSize(long id) const = 0;
    BITPIT_DEPRECATED(long countFreeCells() const);
    long countBorderCells() const;
    long countOrphanCells() const;
    std::vector<long> findOrphanCells() const;
    long countDuplicateCells() const;
    std::vector<long> findDuplicateCells() const;
 
    virtual std::array<double, 3> evalCellCentroid(long id) const;
    virtual void evalCellBoundingBox(long id, std::array<double,3> *minPoint, std::array<double,3> *maxPoint) const;
    BITPIT_DEPRECATED(ConstProxyVector<std::array<double BITPIT_COMMA 3>> getCellVertexCoordinates(long id) const);
    void getCellVertexCoordinates(long id, std::unique_ptr<std::array<double, 3>[]> *coordinates) const;
    void getCellVertexCoordinates(long id, std::array<double, 3> *coordinates) const;
    std::vector<long> findCellNeighs(long id) const;
    void findCellNeighs(long id, std::vector<long> *neighs) const;
    std::vector<long> findCellNeighs(long id, int codimension, bool complete = true) const;
    void findCellNeighs(long id, int codimension, bool complete, std::vector<long> *neighs) const;
    std::vector<long> findCellFaceNeighs(long id) const;
    void findCellFaceNeighs(long id, std::vector<long> *neighs) const;
    std::vector<long> findCellFaceNeighs(long id, int face) const;
    void findCellFaceNeighs(long id, int face, std::vector<long> *neighs) const;
    std::vector<long> findCellEdgeNeighs(long id, bool complete = true) const;
    void findCellEdgeNeighs(long id, bool complete, std::vector<long> *neighs) const;
    std::vector<long> findCellEdgeNeighs(long id, int edge) const;
    void findCellEdgeNeighs(long id, int edge, std::vector<long> *neighs) const;
    std::vector<long> findCellVertexNeighs(long id, bool complete = true) const;
    void findCellVertexNeighs(long id, bool complete, std::vector<long> *neighs) const;
    std::vector<long> findCellVertexNeighs(long id, int vertex) const;
    void findCellVertexNeighs(long id, int vertex, std::vector<long> *neighs) const;
    std::vector<long> findCellVertexOneRing(long id, int vertex) const;
    void findCellVertexOneRing(long id, int vertex, std::vector<long> *neighs) const;
    bool findFaceNeighCell(long cellId, long neighId, int *cellFace, int *cellAdjacencyId) const;
 
    std::set<int> getInternalCellPIDs();
    std::vector<long> getInternalCellsByPID(int pid);
 
    std::vector<long> findVertexOneRing(long vertexId) const;
    void findVertexOneRing(long vertexId, std::vector<long> *ring) const;
 
    CellIterator getCellIterator(long id);
    CellIterator cellBegin();
    CellIterator cellEnd();
    CellIterator internalCellBegin();
    BITPIT_DEPRECATED(CellIterator internalBegin());
    CellIterator internalCellEnd();
    BITPIT_DEPRECATED(CellIterator internalEnd());
#if BITPIT_ENABLE_MPI==1
    CellIterator ghostCellBegin();
    BITPIT_DEPRECATED(CellIterator ghostBegin());
    CellIterator ghostCellEnd();
    BITPIT_DEPRECATED(CellIterator ghostEnd());
#endif
 
    CellConstIterator getCellConstIterator(long id) const;
    CellConstIterator cellConstBegin() const;
    CellConstIterator cellConstEnd() const;
    CellConstIterator internalCellConstBegin() const;
    BITPIT_DEPRECATED(CellConstIterator internalConstBegin() const);
    CellConstIterator internalCellConstEnd() const;
    BITPIT_DEPRECATED(CellConstIterator internalConstEnd() const);
#if BITPIT_ENABLE_MPI==1
    CellConstIterator ghostCellConstBegin() const;
    BITPIT_DEPRECATED(CellConstIterator ghostConstBegin() const);
    CellConstIterator ghostCellConstEnd() const;
    BITPIT_DEPRECATED(CellConstIterator ghostConstEnd() const);
#endif
 
    bool isInterfaceAutoIndexingEnabled() const;
    void setInterfaceAutoIndexing(bool enabled);
 
    virtual long getInterfaceCount() const;
    PiercedVector<Interface> &getInterfaces();
    const PiercedVector<Interface> & getInterfaces() const;
    Interface &getInterface(long id);
    const Interface &getInterface(long id) const;
    virtual ElementType getInterfaceType(long id) const;
    InterfaceIterator addInterface(const Interface &source, long id = Element::NULL_ID);
    InterfaceIterator addInterface(Interface &&source, long id = Element::NULL_ID);
    InterfaceIterator addInterface(ElementType type, long id = Element::NULL_ID);
    InterfaceIterator addInterface(ElementType type, const std::vector<long> &connectivity, long id = Element::NULL_ID);
    InterfaceIterator addInterface(ElementType type, std::unique_ptr<long[]> &&connectStorage, long id = Element::NULL_ID);
    bool deleteInterface(long id);
    template<typename IdStorage>
    bool deleteInterfaces(const IdStorage &ids);
    BITPIT_DEPRECATED(long countFreeInterfaces() const);
    long countBorderInterfaces() const;
    long countOrphanInterfaces() const;
    std::vector<long> findOrphanInterfaces() const;
    bool deleteOrphanInterfaces();
    bool isInterfaceOrphan(long id) const;
    virtual std::array<double, 3> evalInterfaceCentroid(long id) const;
    virtual void evalInterfaceBoundingBox(long id, std::array<double,3> *minPoint, std::array<double,3> *maxPoint) const;
    BITPIT_DEPRECATED(ConstProxyVector<std::array<double BITPIT_COMMA 3>> getInterfaceVertexCoordinates(long id) const);
    void getInterfaceVertexCoordinates(long id, std::unique_ptr<std::array<double, 3>[]> *coordinates) const;
    void getInterfaceVertexCoordinates(long id, std::array<double, 3> *coordinates) const;
        bool intersectInterfacePlane(long id, std::array<double, 3> P, std::array<double, 3> nP, std::array<std::array<double, 3>, 2> *intersection, std::vector<std::array<double, 3>> *polygon) const;
 
    InterfaceIterator getInterfaceIterator(long id);
    InterfaceIterator interfaceBegin();
    InterfaceIterator interfaceEnd();
 
    InterfaceConstIterator getInterfaceConstIterator(long id) const;
    InterfaceConstIterator interfaceConstBegin() const;
    InterfaceConstIterator interfaceConstEnd() const;
 
    long countFaces() const;
    long countBorderFaces() const;
    BITPIT_DEPRECATED(long countFreeFaces() const);
 
    bool sort();
    bool sortVertices();
    bool sortCells();
    bool sortInterfaces();
 
    bool squeeze();
    bool squeezeVertices();
    bool squeezeCells();
    bool squeezeInterfaces();
 
    long locatePoint(double x, double y, double z) const;
    virtual long locatePoint(const std::array<double, 3> &point) const = 0;
 
    AdjacenciesBuildStrategy getAdjacenciesBuildStrategy() const;
    bool areAdjacenciesDirty(bool global = false) const;
    BITPIT_DEPRECATED(void buildAdjacencies());
    void initializeAdjacencies(AdjacenciesBuildStrategy strategy = ADJACENCIES_AUTOMATIC);
    void updateAdjacencies(bool forcedUpdated = false);
    void destroyAdjacencies();
 
    InterfacesBuildStrategy getInterfacesBuildStrategy() const;
    bool areInterfacesDirty(bool global = false) const;
    BITPIT_DEPRECATED(void buildInterfaces());
    void initializeInterfaces(InterfacesBuildStrategy strategy = INTERFACES_AUTOMATIC);
    void updateInterfaces(bool forcedUpdated = false);
    void destroyInterfaces();
 
    void getBoundingBox(std::array<double, 3> &minPoint, std::array<double, 3> &maxPoint) const;
    void getBoundingBox(bool global, std::array<double, 3> &minPoint, std::array<double, 3> &maxPoint) const;
    bool isBoundingBoxDirty(bool global = false) const;
    void updateBoundingBox(bool forcedUpdated = false);
 
    virtual void translate(const std::array<double, 3> &translation);
    void translate(double sx, double sy, double sz);
    virtual void rotate(const std::array<double, 3> &n0, const std::array<double, 3> &n1, double angle);
    void rotate(double n0x, double n0y, double n0z, double n1x, double n1y, double n1z, double angle);
    void scale(const std::array<double, 3> &scaling);
    virtual void scale(const std::array<double, 3> &scaling, const std::array<double, 3> &origin);
    void scale(double scaling);
    void scale(double scaling, const std::array<double, 3> &origin);
    void scale(double sx, double sy, double sz);
    void scale(double sx, double sy, double sz, const std::array<double, 3> &origin);
 
    void setTol(double tolerance);
    double getTol() const;
    void resetTol();
    bool isTolCustomized() const;
 
    void displayTopologyStats(std::ostream &out, unsigned int padding = 0) const;
    void displayVertices(std::ostream &out, unsigned int padding = 0) const;
    void displayCells(std::ostream &out, unsigned int padding = 0) const;
    void displayInterfaces(std::ostream &out, unsigned int padding = 0) const;
 
    VTKUnstructuredGrid & getVTK();
    const VTKUnstructuredGrid & getVTK() const;
    WriteTarget getVTKWriteTarget() const;
    void setVTKWriteTarget(WriteTarget targetCells);
    const CellConstRange getVTKCellWriteRange() const;
    void write(VTKWriteMode mode = VTKWriteMode::DEFAULT);
    void write(VTKWriteMode mode, double time);
    void write(const std::string &name, VTKWriteMode mode = VTKWriteMode::DEFAULT);
    void write(const std::string &name, VTKWriteMode mode, double time);
 
    void flushData(std::fstream &stream, const std::string &name, VTKFormat format) override;
 
    int getDumpVersion() const;
    bool dump(std::ostream &stream);
    bool dump(std::ostream &stream) const;
    void restore(std::istream &stream, bool reregister = false);
 
    void consecutiveRenumberVertices(long offset = 0);
    void consecutiveRenumberCells(long offset = 0);
    void consecutiveRenumberInterfaces(long offset = 0);
    void consecutiveRenumber(long offsetVertices, long offsetCells, long offsetInterfaces);
 
#if BITPIT_ENABLE_MPI==1
    const MPI_Comm & getCommunicator() const;
    int getRank() const;
    int getProcessorCount() const;
 
    bool isDistributed(bool allowDirty = false) const;
    int getOwner(bool allowDirty = false) const;
 
    void setHaloSize(std::size_t haloSize);
    std::size_t getHaloSize() const;
 
    int getCellOwner(long id) const;
    BITPIT_DEPRECATED(int getCellRank(long id) const);
    int getCellHaloLayer(long id) const;
 
    int getVertexOwner(long id) const;
    BITPIT_DEPRECATED(int getVertexRank(long id) const);
 
    bool isRankNeighbour(int rank);
    std::vector<int> getNeighbourRanks();
 
    const std::unordered_map<int, std::vector<long>> & getGhostVertexExchangeTargets() const;
    const std::vector<long> & getGhostVertexExchangeTargets(int rank) const;
    const std::unordered_map<int, std::vector<long>> & getGhostVertexExchangeSources() const;
    const std::vector<long> & getGhostVertexExchangeSources(int rank) const;
 
    const std::unordered_map<int, std::vector<long>> & getGhostCellExchangeTargets() const;
    BITPIT_DEPRECATED(const std::unordered_map<int BITPIT_COMMA std::vector<long>> & getGhostExchangeTargets() const);
    const std::vector<long> & getGhostCellExchangeTargets(int rank) const;
    BITPIT_DEPRECATED(const std::vector<long> & getGhostExchangeTargets(int rank) const);
    const std::unordered_map<int, std::vector<long>> & getGhostCellExchangeSources() const;
    BITPIT_DEPRECATED(const std::unordered_map<int BITPIT_COMMA std::vector<long>> & getGhostExchangeSources() const);
    const std::vector<long> & getGhostCellExchangeSources(int rank) const;
    BITPIT_DEPRECATED(const std::vector<long> & getGhostExchangeSources(int rank) const);
 
    bool isPartitioned() const;
    bool isPartitioningSupported() const;
    bool arePartitioningInfoDirty(bool global = true) const;
    PartitioningMode getPartitioningMode() const;
    PartitioningStatus getPartitioningStatus(bool global = false) const;
    double evalPartitioningUnbalance() const;
    double evalPartitioningUnbalance(const std::unordered_map<long, double> &cellWeights) const;
    BITPIT_DEPRECATED(std::vector<adaption::Info> partition(MPI_Comm communicator, const std::unordered_map<long, int> &cellRanks, bool trackPartitioning, bool squeezeStorage = false, std::size_t haloSize = 1));
    std::vector<adaption::Info> partition(const std::unordered_map<long, int> &cellRanks, bool trackPartitioning, bool squeezeStorage = false);
    BITPIT_DEPRECATED(std::vector<adaption::Info> partition(MPI_Comm communicator, const std::unordered_map<long, double> &cellWeights, bool trackPartitioning, bool squeezeStorage = false, std::size_t haloSize = 1));
    std::vector<adaption::Info> partition(const std::unordered_map<long, double> &cellWeights, bool trackPartitioning, bool squeezeStorage = false);
    BITPIT_DEPRECATED(std::vector<adaption::Info> partition(MPI_Comm communicator, bool trackPartitioning, bool squeezeStorage = false, std::size_t haloSize = 1));
    std::vector<adaption::Info> partition(bool trackPartitioning, bool squeezeStorage = false);
    BITPIT_DEPRECATED(std::vector<adaption::Info> partitioningPrepare(MPI_Comm communicator, const std::unordered_map<long, int> &cellRanks, bool trackPartitioning, std::size_t haloSize = 1));
    std::vector<adaption::Info> partitioningPrepare(const std::unordered_map<long, int> &cellRanks, bool trackPartitioning);
    BITPIT_DEPRECATED(std::vector<adaption::Info> partitioningPrepare(MPI_Comm communicator, const std::unordered_map<long, double> &cellWeights, bool trackPartitioning, std::size_t haloSize = 1));
    std::vector<adaption::Info> partitioningPrepare(const std::unordered_map<long, double> &cellWeights, bool trackPartitioning);
    BITPIT_DEPRECATED(std::vector<adaption::Info> partitioningPrepare(MPI_Comm communicator, bool trackPartitioning, std::size_t haloSize = 1));
    std::vector<adaption::Info> partitioningPrepare(bool trackPartitioning);
    std::vector<adaption::Info> partitioningAlter(bool trackPartitioning = true, bool squeezeStorage = false);
    void partitioningCleanup();
#endif
 
    template<typename Function>
    void processCellNeighbours(long seedId, int nLayers, Function function) const;
    template<typename Selector, typename Function>
    void processCellNeighbours(long seedId, int nLayers, Selector isSelected, Function function) const;
    template<typename Function, typename SeedContainer>
    void processCellsNeighbours(const SeedContainer &seedIds, int nLayers, Function function) const;
    template<typename Selector, typename Function, typename SeedContainer>
    void processCellsNeighbours(const SeedContainer &seedIds, int nLayers, Selector isSelected, Function function) const;
    template<typename Function>
    void processCellFaceNeighbours(long seedId, int nLayers, Function function) const;
    template<typename Selector, typename Function>
    void processCellFaceNeighbours(long seedId, int nLayers, Selector isSelected, Function function) const;
    template<typename Function, typename SeedContainer>
    void processCellsFaceNeighbours(const SeedContainer &seedIds, int nLayers, Function function) const;
    template<typename Selector, typename Function, typename SeedContainer>
    void processCellsFaceNeighbours(const SeedContainer &seedIds, int nLayers, Selector isSelected, Function function) const;
 
    std::array<double, 3> evalElementCentroid(const Element &element) const;
    void evalElementBoundingBox(const Element &element, std::array<double,3> *minPoint, std::array<double,3> *maxPoint) const;
    BITPIT_DEPRECATED(ConstProxyVector<std::array<double BITPIT_COMMA 3>> getElementVertexCoordinates(const Element &element) const);
    void getElementVertexCoordinates(const Element &element, std::unique_ptr<std::array<double, 3>[]> *coordinates) const;
    void getElementVertexCoordinates(const Element &element, std::array<double, 3> *coordinates) const;
 
protected:
    typedef uint16_t AlterationFlags;
    typedef std::unordered_map<long, AlterationFlags> AlterationFlagsStorage;
 
#if BITPIT_ENABLE_MPI==1
    const static double DEFAULT_PARTITIONING_WEIGTH;
#endif
 
    const static AlterationFlags FLAG_NONE              = 0x0;
    const static AlterationFlags FLAG_DELETED           = (1u << 0);
    const static AlterationFlags FLAG_ADJACENCIES_DIRTY = (1u << 1);
    const static AlterationFlags FLAG_INTERFACES_DIRTY  = (1u << 2);
    const static AlterationFlags FLAG_DANGLING          = (1u << 3);
 
    PiercedVector<Vertex> m_vertices;
    PiercedVector<Cell> m_cells;
    PiercedVector<Interface> m_interfaces;
 
    AlterationFlagsStorage m_alteredCells;
    AlterationFlagsStorage m_alteredInterfaces;
 
#if BITPIT_ENABLE_MPI==1
    PatchKernel(MPI_Comm communicator, std::size_t haloSize, AdaptionMode adaptionMode, PartitioningMode partitioningMode);
    PatchKernel(int dimension, MPI_Comm communicator, std::size_t haloSize, AdaptionMode adaptionMode, PartitioningMode partitioningMode);
    PatchKernel(int id, int dimension, MPI_Comm communicator, std::size_t haloSize, AdaptionMode adaptionMode, PartitioningMode partitioningMode);
#else
    PatchKernel(AdaptionMode adaptionMode);
    PatchKernel(int dimension, AdaptionMode adaptionMode);
    PatchKernel(int id, int dimension, AdaptionMode adaptionMode);
#endif
    PatchKernel(const PatchKernel &other);
    PatchKernel & operator=(const PatchKernel &other) = delete;
 
    void clearBoundingBox();
    bool isBoundingBoxFrozen() const;
    void setBoundingBoxFrozen(bool frozen);
    void setBoundingBoxDirty(bool dirty);
    void setBoundingBox(const std::array<double, 3> &minPoint, const std::array<double, 3> &maxPoint);
 
#if BITPIT_ENABLE_MPI==1
    bool isCommunicatorSet() const;
    virtual void setCommunicator(MPI_Comm communicator);
#endif
 
#if BITPIT_ENABLE_MPI==1
    CellIterator restoreCell(ElementType type, std::unique_ptr<long[]> &&connectStorage, int owner, int haloLayer, long id);
#else
    CellIterator restoreCell(ElementType type, std::unique_ptr<long[]> &&connectStorage, long id);
#endif
 
    InterfaceIterator restoreInterface(ElementType type, std::unique_ptr<long[]> &&connectStorage, long id);
 
#if BITPIT_ENABLE_MPI==1
    VertexIterator restoreVertex(const std::array<double, 3> &coords, int owner, long id);
#else
    VertexIterator restoreVertex(const std::array<double, 3> &coords, long id);
#endif
 
    bool deleteVertex(long id);
    template<typename IdStorage>
    bool deleteVertices(const IdStorage &ids);
#if BITPIT_ENABLE_MPI==1
    VertexIterator ghostVertex2InternalVertex(long id);
    VertexIterator internalVertex2GhostVertex(long id, int owner);
#endif
 
    void dumpVertices(std::ostream &stream) const;
    void restoreVertices(std::istream &stream);
 
    void dumpCells(std::ostream &stream) const;
    void restoreCells(std::istream &stream);
 
    void dumpInterfaces(std::ostream &stream) const;
    void restoreInterfaces(std::istream &stream);
 
    void updateLastInternalVertexId();
#if BITPIT_ENABLE_MPI==1
    void updateFirstGhostVertexId();
#endif
 
    void updateLastInternalCellId();
#if BITPIT_ENABLE_MPI==1
    void updateFirstGhostCellId();
#endif
 
    std::unordered_map<long, std::vector<long>> binGroupVertices(const PiercedVector<Vertex> &vertices, int nBins);
    std::unordered_map<long, std::vector<long>> binGroupVertices(int nBins);
 
    void setAdjacenciesBuildStrategy(AdjacenciesBuildStrategy status);
    void resetAdjacencies();
    void pruneStaleAdjacencies();
    virtual void _resetAdjacencies(bool release);
    virtual void _updateAdjacencies();
 
    void setInterfacesBuildStrategy(InterfacesBuildStrategy status);
    void pruneStaleInterfaces();
    virtual void _resetInterfaces(bool release);
    virtual void _updateInterfaces();
 
    bool testCellAlterationFlags(long id, AlterationFlags flags) const;
    AlterationFlags getCellAlterationFlags(long id) const;
    void resetCellAlterationFlags(long id, AlterationFlags flags = FLAG_NONE);
    void setCellAlterationFlags(AlterationFlags flags);
    void setCellAlterationFlags(long id, AlterationFlags flags);
    void unsetCellAlterationFlags(AlterationFlags flags);
    void unsetCellAlterationFlags(long id, AlterationFlags flags);
 
    bool testInterfaceAlterationFlags(long id, AlterationFlags flags) const;
    AlterationFlags getInterfaceAlterationFlags(long id) const;
    void resetInterfaceAlterationFlags(long id, AlterationFlags flags = FLAG_NONE);
    void setInterfaceAlterationFlags(AlterationFlags flags);
    void setInterfaceAlterationFlags(long id, AlterationFlags flags);
    void unsetInterfaceAlterationFlags(AlterationFlags flags);
    void unsetInterfaceAlterationFlags(long id, AlterationFlags flags);
 
    bool testAlterationFlags(AlterationFlags availableFlags, AlterationFlags requestedFlags) const;
 
    void setAdaptionMode(AdaptionMode mode);
    void setAdaptionStatus(AdaptionStatus status);
    virtual std::vector<adaption::Info> _adaptionPrepare(bool trackAdaption);
    virtual std::vector<adaption::Info> _adaptionAlter(bool trackAdaption);
    virtual void _adaptionCleanup();
    virtual bool _markCellForRefinement(long id);
    virtual bool _markCellForCoarsening(long id);
    virtual bool _resetCellAdaptionMarker(long id);
    virtual adaption::Marker _getCellAdaptionMarker(long id);
    virtual bool _enableCellBalancing(long id, bool enabled);
 
    virtual void _setTol(double tolerance);
    virtual void _resetTol();
 
    virtual int _getDumpVersion() const = 0;
    virtual void _dump(std::ostream &stream) const = 0;
    virtual void _restore(std::istream &stream) = 0;
 
    virtual long _getCellNativeIndex(long id) const;
 
    virtual void _findCellNeighs(long id, const std::vector<long> *blackList, std::vector<long> *neighs) const;
    virtual void _findCellFaceNeighs(long id, int face, const std::vector<long> *blackList, std::vector<long> *neighs) const;
    virtual void _findCellEdgeNeighs(long id, int edge, const std::vector<long> *blackList, std::vector<long> *neighs) const;
    virtual void _findCellVertexNeighs(long id, int vertex, const std::vector<long> *blackList, std::vector<long> *neighs) const;
 
    virtual void _writePrepare();
    virtual void _writeFinalize();
 
    BITPIT_DEPRECATED(void setExpert(bool expert));
 
    void extractEnvelope(PatchKernel &envelope) const;
 
    void addPointToBoundingBox(const std::array<double, 3> &point);
    void removePointFromBoundingBox(const std::array<double, 3> &point);
#if BITPIT_ENABLE_MPI==1
    virtual std::size_t _getMaxHaloSize();
    virtual void _setHaloSize(std::size_t haloSize);
 
    void setPartitioned(bool partitioned);
    void setPartitioningMode(PartitioningMode mode);
    void setPartitioningStatus(PartitioningStatus status);
    virtual std::vector<adaption::Info> _partitioningPrepare(const std::unordered_map<long, double> &cellWeights, double defaultWeight, bool trackPartitioning);
    virtual std::vector<adaption::Info> _partitioningPrepare(const std::unordered_map<long, int> &cellRanks, bool trackPartitioning);
    virtual std::vector<adaption::Info> _partitioningAlter(bool trackPartitioning);
    virtual void _partitioningCleanup();
 
    virtual std::vector<long> _findGhostCellExchangeSources(int rank);
#endif
 
    template<typename item_t, typename id_t = long>
    std::unordered_map<id_t, id_t> consecutiveItemRenumbering(PiercedVector<item_t, id_t> &container, long offset);
 
    template<typename item_t, typename id_t = long>
    void mappedItemRenumbering(PiercedVector<item_t, id_t> &container, const std::unordered_map<id_t, id_t> &renumberMap);
 
    virtual int findAdjoinNeighFace(const Cell &cell, int cellFace, const Cell &neigh) const;
    virtual bool isSameFace(const Cell &cell_A, int face_A, const Cell &cell_B, int face_B) const;
 
private:
    struct GhostVertexInfo {
        int owner;
    };
 
    struct GhostCellInfo {
        int owner;
        int haloLayer;
    };
 
    std::unique_ptr<IndexGenerator<long>> m_vertexIdGenerator;
    std::unique_ptr<IndexGenerator<long>> m_interfaceIdGenerator;
    std::unique_ptr<IndexGenerator<long>> m_cellIdGenerator;
 
    long m_nInternalVertices;
#if BITPIT_ENABLE_MPI==1
    long m_nGhostVertices;
#endif
 
    long m_lastInternalVertexId;
#if BITPIT_ENABLE_MPI==1
    long m_firstGhostVertexId;
#endif
 
    long m_nInternalCells;
#if BITPIT_ENABLE_MPI==1
    long m_nGhostCells;
#endif
 
    long m_lastInternalCellId;
#if BITPIT_ENABLE_MPI==1
    long m_firstGhostCellId;
#endif
 
    VTKUnstructuredGrid m_vtk ;
    WriteTarget m_vtkWriteTarget;
    PiercedStorage<long, long> m_vtkVertexMap;
 
    bool m_boxFrozen;
    bool m_boxDirty;
    std::array<double, 3> m_boxMinPoint;
    std::array<double, 3> m_boxMaxPoint;
    std::array<int, 3> m_boxMinCounter;
    std::array<int, 3> m_boxMaxCounter;
 
    AdjacenciesBuildStrategy m_adjacenciesBuildStrategy;
 
    InterfacesBuildStrategy m_interfacesBuildStrategy;
 
    AdaptionMode m_adaptionMode;
    AdaptionStatus m_adaptionStatus;
 
    int m_id;
    int m_dimension;
 
    bool m_toleranceCustom;
    double m_tolerance;
 
    int m_rank;
    int m_nProcessors;
#if BITPIT_ENABLE_MPI==1
    MPI_Comm m_communicator;
    PartitioningMode m_partitioningMode;
    PartitioningStatus m_partitioningStatus;
 
    int m_owner;
 
    std::size_t m_haloSize;
 
    int m_partitioningCellsTag;
    int m_partitioningVerticesTag;
    bool m_partitioningSerialization;
    std::unordered_map<long, int> m_partitioningOutgoings;
    std::vector<std::pair<int, int>> m_partitioningGlobalExchanges;
 
    bool m_partitioningInfoDirty;
 
    std::unordered_map<long, GhostVertexInfo> m_ghostVertexInfo;
    std::unordered_map<int, std::vector<long>> m_ghostVertexExchangeTargets;
    std::unordered_map<int, std::vector<long>> m_ghostVertexExchangeSources;
 
    std::unordered_map<long, GhostCellInfo> m_ghostCellInfo;
    std::unordered_map<int, std::vector<long>> m_ghostCellExchangeTargets;
    std::unordered_map<int, std::vector<long>> m_ghostCellExchangeSources;
 
    void setGhostVertexInfo(long id, int owner);
    void unsetGhostVertexInfo(long id);
    void clearGhostVerticesInfo();
 
    void setGhostCellInfo(long id, int owner, int haloLayer);
    void unsetGhostCellInfo(long id);
    void clearGhostCellsInfo();
 
    void computeCellHaloLayer(int id);
 
    void _partitioningAlter_deleteGhosts();
 
    std::unordered_map<long, int> _partitioningAlter_evalGhostCellOwnershipChanges();
    void _partitioningAlter_applyGhostCellOwnershipChanges(int sendRank, std::unordered_map<long, int> *ghostCellOwnershipChanges);
 
    std::vector<adaption::Info> _partitioningAlter_sendCells(const std::unordered_set<int> &recvRanks, bool trackPartitioning, std::unordered_map<long, int> *ghostCellOwnershipChanges);
    std::vector<adaption::Info> _partitioningAlter_receiveCells(const std::unordered_set<int> &sendRanks, bool trackPartitioning, std::unordered_map<long, int> *ghostCellOwnershipChanges);
 
    void setPartitioningInfoDirty(bool dirty);
 
    void updatePartitioningInfo(bool forcedUpdated = false);
 
    void updateGhostCellExchangeInfo();
 
    void updateGhostVertexOwners();
    void updateGhostVertexExchangeInfo();
 
    void updateOwner();
    int evalOwner() const;
 
    std::unordered_map<long, int> evaluateExchangeVertexOwners() const;
 
    template<typename ExcludeList>
    bool confirmCellHaloLayer(const Cell &cell, int haloLayer, const ExcludeList &excludeList = ExcludeList()) const;
#endif
 
#if BITPIT_ENABLE_MPI==1
    void initialize(MPI_Comm communicator, std::size_t haloSize);
    void initializeHaloSize(std::size_t haloSize);
    void initializeCommunicator(MPI_Comm communicator);
 
    void freeCommunicator();
#else
    void initialize();
    void initializeSerialCommunicator();
#endif
 
    void finalizeAlterations(bool squeezeStorage = false);
 
    InterfaceIterator buildCellInterface(Cell *cell_1, int face_1, Cell *cell_2, int face_2, long interfaceId = Element::NULL_ID);
 
    void _setId(int id);
 
    bool testElementAlterationFlags(long id, AlterationFlags flags, const AlterationFlagsStorage &flagsStorage) const;
    AlterationFlags getElementAlterationFlags(long id, const AlterationFlagsStorage &flagsStorage) const;
    void resetElementAlterationFlags(long id, AlterationFlags flags, AlterationFlagsStorage *flagsStorage) const;
    void setElementAlterationFlags(long id, AlterationFlags flags, AlterationFlagsStorage *flagsStorage) const;
    void unsetElementAlterationFlags(AlterationFlags flags, AlterationFlagsStorage *flagsStorage) const;
    void unsetElementAlterationFlags(long id, AlterationFlags flags, AlterationFlagsStorage *flagsStorage) const;
 
    void mergeAdaptionInfo(std::vector<adaption::Info> &&source, std::vector<adaption::Info> &destination);
 
    void setRestoredCellAlterationFlags(long id);
    void setAddedCellAlterationFlags(long id);
    void setDeletedCellAlterationFlags(long id);
 
    void setRestoredInterfaceAlterationFlags(long id);
    void setAddedInterfaceAlterationFlags(long id);
    void setDeletedInterfaceAlterationFlags(long id);
 
    void dumpVertexAutoIndexing(std::ostream &stream) const;
    void restoreVertexAutoIndexing(std::istream &stream);
    void createVertexIndexGenerator(bool populate);
    void importVertexIndexGenerator(const PatchKernel &source);
 
    void dumpCellAutoIndexing(std::ostream &stream) const;
    void restoreCellAutoIndexing(std::istream &stream);
    void createCellIndexGenerator(bool populate);
    void importCellIndexGenerator(const PatchKernel &source);
 
    void dumpInterfaceAutoIndexing(std::ostream &stream) const;
    void restoreInterfaceAutoIndexing(std::istream &stream);
    void createInterfaceIndexGenerator(bool populate);
    void importInterfaceIndexGenerator(const PatchKernel &source);
 
    VertexIterator _addInternalVertex(const std::array<double, 3> &coords, long id);
 
    void _restoreInternalVertex(const VertexIterator &iterator, const std::array<double, 3> &coords);
#if BITPIT_ENABLE_MPI==1
    void _restoreGhostVertex(const VertexIterator &iterator, const std::array<double, 3> &coords, int owner);
#endif
 
    void _deleteInternalVertex(long id);
#if BITPIT_ENABLE_MPI==1
    void _deleteGhostVertex(long id);
#endif
 
    CellIterator _addInternalCell(ElementType type, std::unique_ptr<long[]> &&connectStorage, long id);
#if BITPIT_ENABLE_MPI==1
    CellIterator _addGhostCell(ElementType type, std::unique_ptr<long[]> &&connectStorage, int owner, int haloLayer, long id);
#endif
 
    void _restoreInternalCell(const CellIterator &iterator, ElementType type, std::unique_ptr<long[]> &&connectStorage);
#if BITPIT_ENABLE_MPI==1
    void _restoreGhostCell(const CellIterator &iterator, ElementType type, std::unique_ptr<long[]> &&connectStorage, int owner, int haloLayer);
#endif
 
    void _deleteInternalCell(long id);
#if BITPIT_ENABLE_MPI==1
    void _deleteGhostCell(long id);
#endif
 
    InterfaceIterator _addInterface(ElementType type, std::unique_ptr<long[]> &&connectStorage, long id);
 
    void _restoreInterface(const InterfaceIterator &iterator, ElementType type, std::unique_ptr<long[]> &&connectStorage);
 
    void _deleteInterface(long id);
 
    void replaceVTKStreamer(const VTKBaseStreamer *original, VTKBaseStreamer *updated);
 
};
 
}
 
// Template implementation
#include "patch_kernel.tpp"
#include "patch_kernel_parallel.tpp"
 
#endif